Hi Anne-Marie12
I'm sorry to see that no one has replied to you yet, I hope you were able to get this resolved. In most cases, processing a $0 pay for those terminated employees fixed the issue as it was caused by terminated employees not being made active prior to moving to STP Phase 2. If that didn't work we would need to look at the ATO reporting categories and screenshots of those reports.
Please do let me know if you need further assistance.
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