Hi KylieRB
Sorry to see that no one has replied to you yet. When you pay bills from the To Do List the Pay bills transaction is posted to the account selected in Setup>>Linked Accounts>>Purchases Accounts>>Bank account for paying bills. If you want to pay bills using an ABA file you would need to change the account selected in that field to the electronic clearing account. Pay bills transactions will then appear in the Prepare electronic payments window.
Please let me know if you need further help.
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