Stripe & MYOB

HI, I have recently been using the intergration with Stripe, an have trouble reconciling accounts.

When the online invoice is paid, it shows paid on our accounts, but of course money doesn;t come through for several days later. The paid amount shows under 1-2001 Undeposited Funds.
When we receive the money it then arrives in to our account less the 0.25c fee.  How do I then reconcile this in MYOB? If I try to allocate it to the invoice visa the Bank transactions fees screen it will be short the 0.25c fee and won't save, but how does this resolve the amount in the 1-2001 Undeposited Funds? Many thanks