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Hi AATM
Sorry to see that no one has replied to you yet. The Summary of payments reports are sent to the ATO when you finalise so you need to make sure these have the correct values.
The YTD verification report and Summary of payments reports filter the YTD amounts according to the ATO reporting categories assigned to the payroll categories. If the ATO reporting category is Allowance - other, the payment amount will be reported as Allowance - other in those reports.
For the bonus payments, check the ATO reporting category assigned to the payroll category. If you've moved to Phase 2 these payments would generally be assigned the Bonus and Commissions ATO reporting category. If you're still in Phase 1 they will be reported according to the Phase 1 ATO reporting category.
Please let me know if you need further help.
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