Hi becn
To reconcile payroll run the Payroll activity and Payroll register reports and make sure they are the same. The payslips are pulling the YTD amounts from the file at the pay period date.
To reconcile STP run the Payroll summary report (Reporting>>Payroll) and the YTD verification report (STP reporting centre>>EOFY finalisation tab) and check these reports reconcile.
Let me know how you go with those reports.
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