Hi Tracey,
Thanks so much for your reply. I followed your guidelines for the 0 pay for this employee and the figures adjusted in STP reporting so I could then "set as final" for this employee and send the data to the ATO. My MYOB payroll reconciles to the STP figures now :)
Once I worked out this issue all has flowed perfectly and the STP has been an easier option for me this year with EOFY payroll reporting.....but in saying that the payroll reporting in MYOB is alphabetically listed by surname and the reporting in STP is alphabetically listed by first name so when reconciling the two it was somewhat more time consuming!!!
Happy EOFY