STP recorded as an Update Event instead of a Pay Event

Hi,

I ran our usual payroll for our staff for the week ending 26/10.  However, the following day, my collegue ran an additional pay run for a single employee that had been missed from the run.  The payroll date was recorded at 26/10 so resulted in an Update Event report via STP reporting to the ATO.

The STP Reporting list shows the value of the addtional pay run as being $0 (screenshot attached).  However when I run the Employee YTD Report from the listing it shows the correct amount of the processed pay run along with the tax withheld of $17.

My issue is that now I am about to lodge my PAYG report with the ATO through the portal for the October period and the balance of my Payroll Activity report does not match with the reported total that the ATO is showing ($17 short).  My Payroll Activity report for the month has included the withheld tax amount from the additional pay run but the STP ATO reported total for the month is less that one pay run amount ($17).

How do I ensure that the correct reporting amount and also ensure the amount of tax withheld for this particular employee will be reported to the ATO correctly?  Do I just edit the total PAYG amount to match my Payroll Activity Report within the ATO portal?  Do I need to do an adjusment or correction within MYOB? Please help!!